Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EXF47487.1 | EXF47488.1 | BAY1663_00161 | BAY1663_00162 | General secretion protein J. | General secretory pathway protein H/U. | 0.995 |
EXF47487.1 | EXF47490.1 | BAY1663_00161 | BAY1663_00164 | General secretion protein J. | General secretory pathway protein I/V. | 0.992 |
EXF47487.1 | EXF47491.1 | BAY1663_00161 | BAY1663_00165 | General secretion protein J. | HxcT pseudopilin. | 0.926 |
EXF47487.1 | EXF47492.1 | BAY1663_00161 | BAY1663_00166 | General secretion protein J. | General secretion pathway protein K. | 0.988 |
EXF47487.1 | EXF47495.1 | BAY1663_00161 | BAY1663_00169 | General secretion protein J. | Type II and III secretion system protein. | 0.859 |
EXF47487.1 | EXF47499.1 | BAY1663_00161 | BAY1663_00173 | General secretion protein J. | Type II secretion system protein F; Overlaps another CDS with the same product name. | 0.787 |
EXF47487.1 | xcpT | BAY1663_00161 | BAY1663_04521 | General secretion protein J. | General secretion pathway protein G. | 0.916 |
EXF47487.1 | xcpW | BAY1663_00161 | BAY1663_05053 | General secretion protein J. | General secretion pathway protein J. | 0.807 |
EXF47487.1 | xcpX | BAY1663_00161 | BAY1663_05052 | General secretion protein J. | General secretion pathway protein K. | 0.973 |
EXF47488.1 | EXF47487.1 | BAY1663_00162 | BAY1663_00161 | General secretory pathway protein H/U. | General secretion protein J. | 0.995 |
EXF47488.1 | EXF47490.1 | BAY1663_00162 | BAY1663_00164 | General secretory pathway protein H/U. | General secretory pathway protein I/V. | 0.852 |
EXF47488.1 | EXF47491.1 | BAY1663_00162 | BAY1663_00165 | General secretory pathway protein H/U. | HxcT pseudopilin. | 0.913 |
EXF47488.1 | EXF47492.1 | BAY1663_00162 | BAY1663_00166 | General secretory pathway protein H/U. | General secretion pathway protein K. | 0.960 |
EXF47488.1 | EXF47495.1 | BAY1663_00162 | BAY1663_00169 | General secretory pathway protein H/U. | Type II and III secretion system protein. | 0.793 |
EXF47488.1 | EXF47499.1 | BAY1663_00162 | BAY1663_00173 | General secretory pathway protein H/U. | Type II secretion system protein F; Overlaps another CDS with the same product name. | 0.858 |
EXF47488.1 | hxcR | BAY1663_00162 | BAY1663_00171 | General secretory pathway protein H/U. | Protein HxcR/XcpR2; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.727 |
EXF47488.1 | xcpT | BAY1663_00162 | BAY1663_04521 | General secretory pathway protein H/U. | General secretion pathway protein G. | 0.899 |
EXF47488.1 | xcpW | BAY1663_00162 | BAY1663_05053 | General secretory pathway protein H/U. | General secretion pathway protein J. | 0.949 |
EXF47488.1 | xcpX | BAY1663_00162 | BAY1663_05052 | General secretory pathway protein H/U. | General secretion pathway protein K. | 0.930 |
EXF47490.1 | EXF47487.1 | BAY1663_00164 | BAY1663_00161 | General secretory pathway protein I/V. | General secretion protein J. | 0.992 |
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