STRINGSTRING
EXF47488.1 EXF47488.1 EXF47487.1 EXF47487.1 EXF47492.1 EXF47492.1 xcpW xcpW xcpX xcpX EXF47491.1 EXF47491.1 xcpT xcpT EXF47499.1 EXF47499.1 EXF47490.1 EXF47490.1 EXF47495.1 EXF47495.1 hxcR hxcR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXF47488.1General secretory pathway protein H/U. (155 aa)    
Predicted Functional Partners:
EXF47487.1
General secretion protein J.
 
 0.995
EXF47492.1
General secretion pathway protein K.
 
 
 0.960
xcpW
General secretion pathway protein J.
 
 0.949
xcpX
General secretion pathway protein K.
 
 
 0.930
EXF47491.1
HxcT pseudopilin.
 
 
 0.913
xcpT
General secretion pathway protein G.
 
 
 0.899
EXF47499.1
Type II secretion system protein F; Overlaps another CDS with the same product name.
 
  
 0.858
EXF47490.1
General secretory pathway protein I/V.
 
  
 0.852
EXF47495.1
Type II and III secretion system protein.
 
  
 0.793
hxcR
Protein HxcR/XcpR2; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.727
Your Current Organism:
Pseudomonas sp. BAY1663
NCBI taxonomy Id: 1439940
Other names: P. sp. BAY1663
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